BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038F11LP1|AL430581
(881 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1430 1692 0.0
>3x_Contig1430
Length = 7411
Score = 1692 bits (852), Expect = 0.0
Identities = 878/884 (99%), Gaps = 3/884 (0%)
Strand = Plus / Minus
Query: 1 gatcaagcaagcaggaaaatggcagtgataatgatacgtctatcttgaattctttaaatt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7090 gatcaagcaagcaggaaaatggcagttataatgatacgtctatcttgaattctttaaatt 7031
Query: 61 tgaaggaggaaataggtaatttggttttatcaattgatacacttaaaaagcagctggagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7030 tgaaggaggaaataggtaatttggttttatcaattgatacacttaaaaagcagctggagc 6971
Query: 121 ttctacatcatttgatattgaaggcggas-taactaataatcaaacgagactgatattgt 179
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 6970 ttctacatcatttgatattgaaggcggagctaactaataatcaaacgagactgatattgt 6911
Query: 180 tgaagaaatcggaaagaacacttagaagagaactggaatacaaagaattgcttaaacaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6910 tgaagaaatcggaaagaacacttagaagagaactggaatacaaagaattgcttaaacaac 6851
Query: 240 agcatatggttcatgagaacgctaatattttatatg-gcagggcaaaactttgtattaaa 298
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6850 agcatatggttcatgagaacgctaatattttatatgcgcagggcaaaactttgtattaaa 6791
Query: 299 tcttatttgactgatgtgtctcttgaagatggtaaagaaactgtttactatttgataaat 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6790 tcttatttgactgatgtgtctcttgaagatggtaaagaaactgtttactatttgataaat 6731
Query: 359 gtacagcatatcttcaacaaccagttagttacgtgggatatacctcgaagattcagcgaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6730 gtacagcatatcttcaacaaccagttagttacgtgggatatacctcgaagattcagcgaa 6671
Query: 419 ttctacaggttgaactcctacttgaagaagaagtatccgggggtggtaagctatttgcaa 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6670 ttctacaggttgaactcctacttgaagaagaagtatccgggggtggtaagctatttgcaa 6611
Query: 479 aattctaatggcttcccggagagagtaaaaatgtcattaaagtatcatgtatcgaaaaca 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6610 aattctaatggcttcccggagagagtaaaaatgtcattaaagtatcatgtatcgaaaaca 6551
Query: 539 ttattgtatgaagaaagaagaaaaagactcgaatactacatgcaggaattgttaaaaata 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6550 ttattgtatgaagaaagaagaaaaagactcgaatactacatgcaggaattgttaaaaata 6491
Query: 599 cgtgaggtttgtcaagatgaatactttagaaaatatttgacggatgtttccaacactttt 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6490 cgtgaggtttgtcaagatgaatactttagaaaatatttgacggatgtttccaacactttt 6431
Query: 659 aaggttaaagagaatttggaagaagatgttgaggataagagaagatcaatggttctttta 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6430 aaggttaaagagaatttggaagaagatgttgaggataagagaagatcaatggttctttta 6371
Query: 719 aagacggacaacaccgttggagaagttacaaatgtatcagcagggagatttgatgatccc 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6370 aagacggacaacaccgttggagaagttacaaatgtatcagcagggagatttgatgatccc 6311
Query: 779 aaaagtttctcagatgaattagatttctttgaggacgagagaaatttccattcgggagcr 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6310 aaaagtttctcagatgaattagatttctttgaggacgagagaaatttccattcgggagca 6251
Query: 839 aatggtagcaacaatacaggaaccttagtg-aacccatatgtga 881
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6250 aatggtagcaacaatacaggaaccttagtgaaacccatatgtga 6207
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9033
Number of Sequences: 1807
Number of extensions: 9033
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 881
length of database: 10,358,551
effective HSP length: 16
effective length of query: 865
effective length of database: 10,329,639
effective search space: 8935137735
effective search space used: 8935137735
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)